Publications of the RTG M-M-M

2024

Nowotnick, A.G., Xi, Z., Jin, Z., Khalatbarizamanpoor, S., Brauer, D.S., Löffler, B., and Jandt, K.D. (2024)
Antimicrobial Biomaterials Based on Physical and Physicochemical Action
Adv. Healthcare Mater. 2402001. https://doi.org/10.1002/adhm.202402001External link

Dasgupta, A., Koerfer, A., Kokot, B., Urbancic, I., Eggeling, C., and Carravilla, P. (2024)
Effects and avoidance of photoconversion-induced artifacts in confocal and STED microscopy
Nat. Methods 21, 1171-1174. https://doi.org/10.1038/s41592-024-02297-4External link 

Valentine, M., Rudolph, P., Dietschmann, A., Tsavou, A., Mogavero, S., Lee, S., Priest, E.L., Zhurgenbayeva, G., Jablonowski, N., Timme, S., Eggeling, C., Allert, S., Dolk, E., Naglik, J.R., Figge, M.T., Gresnigt, M.S., and Hube, B. (2024)
Nanobody-mediated neutralization of candidalysin prevents epithelial damage and inflammatory responses that drive vulvovaginal candidiasis pathogenesis
mBio 15, e0340923.  https://doi.org/10.1128/mbio.03409-23External link 

Seltmann, A., Carravilla, P., Reglinski, K., Eggeling, C., and Waithe, D. (2024)
Neural network informed photon filtering reduces fluorescence correlation spectroscopy artifacts
Biophys. J. 123, 745-755. https://doi.org/10.1016/j.bpj.2024.02.012External link

Timme, S., Wendler, S., Klassert, T.E., Saraiva, J.P., da Rocha, U.N., Wittchen, M., Schramm, S., Ehricht, R., Monecke, S., Edel, B., Rödel, J., Löffler, B., Ramirez, M.S., Slevogt, H., Figge, M.T., and Tuchscherr, L. (2024)
Competitive inhibition and mutualistic growth in co-infections: deciphering Staphylococcus aureus–Acinetobacter baumannii interaction dynamics
ISME Communications 4, ycae077. https://doi.org/10.1093/ismeco/ycae077External link

Özcolak, B., Erenay, B., Odabaş, S., Jandt, K.D., and Garipcan, B. (2024)
Effects of bone surface topography and chemistry on macrophage polarization
Sci. Rep. 14, 12721. https://doi.org/10.1038/s41598-024-62484-3External link

Blondel, M., Machet, C., Wildemann, B., Abidine, Y., and Swider, P. (2024)
Mechanobiology of bacterial biofilms: Implications for orthopedic infection
J. Orthop. Res. 2024, 1-9. https://onlinelibrary.wiley.com/doi/10.1002/jor.25822External link

2023

Hackemann, V.C.J., Hagel, S., Jandt, K.D., Rödel, J., Löffler, B., and Tuchscherr, L. (2023)
The Controversial Effect of Antibiotics on Methicillin-Sensitive S. aureus: A Comparative In Vitro Study
Int. J. Mol. Sci. 24, 16308. https://doi.org/10.3390/ijms242216308External link

Koerfer, A., Reina, F., and Eggeling, C. (2023)
Influence of different surface cleaning methods on STED-FCS and scanning STED-FCS calibration measurements
J. Microsc. 1-4. https://doi.org/10.1111/jmi.13250External link

Svensson, C.-M., Reglinski, K., Schliebs, W., Erdmann, R., Eggeling, C., and Figge, M.T. (2023)
Quantitative analysis of peroxisome tracks using a Hidden Markov Model
Sci Rep 13, 19694. https://doi.org/10.1038/s41598-023-46812-7External link

Vogler, B.T.L., Reina, F., and Eggeling, C. (2023)
Blob-B-Gone: a lightweight framework for removing blob artifacts from 2D/3D MINFLUX single-particle tracking data
Front. Bioinform. 3, 1268899. https://doi.org/10.3389/fbinf.2023.1268899External link

Mandal, S., Tannert, A., Ebert, C., Guliev, R.R., Ozegowski, Y., Carvalho, L., Wildemann, B., Eiserloh, S., Coldewey, S.M., Löffler, B., Silva, L.B., Hoerr, V., Tuchscherr, L., and Neugebauer, U. (2023)
Insights into S. aureus-Induced Bone Deformation in a Mouse Model of Chronic Osteomyelitis Using Fluorescence and Raman Imaging
Int. J. Mol. Sci. 24, 9762. https://doi.org/10.3390/ijms24119762External link